CDS

Accession Number TCMCG057C30177
gbkey CDS
Protein Id XP_018439271.1
Location 315361..316485
Gene LOC108811683
GeneID 108811683
Organism Raphanus sativus

Protein

Length 374aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018583769.1
Definition PREDICTED: E3 ubiquitin-protein ligase Praja-1 isoform X1 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category O
Description E3 ubiquitin-protein ligase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K22378        [VIEW IN KEGG]
EC 2.3.2.27        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000902        [VIEW IN EMBL-EBI]
GO:0000904        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009826        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010026        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016049        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0022412        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032504        [VIEW IN EMBL-EBI]
GO:0032989        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0040007        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048468        [VIEW IN EMBL-EBI]
GO:0048589        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0060560        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090376        [VIEW IN EMBL-EBI]
GO:0090378        [VIEW IN EMBL-EBI]
GO:0090558        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGACGAAGCCCGGTCCTGTAACCAACCTCGAAGAAGAGGCGGAGGACGGTGGTTCAACCGCCGTAGAAAGTTCTATTCTTACACAGGACGACGAGACTACGAGCGTATTCGTCTGCGACGACAGAGACATCGATTGCGATCCTTATTTCCCATTCGCAGGCCACCCGATTTCAGACTCCGGTTCGGATTCGGAGCTCGATCCGTACACCTGTCCCATCGATTTCTTCGATCGAGAGTCTTCCGAGGGGGTGTACTTAGGATCTGAAGGACTCACCGGCGATGATTTCAATGTATGGGGCTTTTACGAACCCAAGGAGGAGGAGATTGTCTTAGGGACTAGATGTGAGTCCGGATCCGGGTCGGATCAGCAAGGGCTTCGAGTGACCGGTCTCGATTCGGATTCCGATTACGAAGATGGCGTGTTCGATTTCACCTCCGGGGCAGATGAACCGGGTCGGGTCGAGGTTGGTGCGGGTCTTCCTCCTGTTTGGGACTACGACTTGGGTGATGATGAAACTGAAGAATGGGAGGAGGTGCAGAACGCTATTAACTGGACGGTTAGGGCTCTTAGTAGATCCGACGAAGAAGAAGAATTGTCTTCGCAATCAAGGGATGATGATGAAGAAGAAGAACATGAGCTTGACTGGCAGGTTTTGATAACTATCAACAACGTTGTTAATTACATCGAACAAGCTGAAGGTATCACGATCAATCCTGGCGATATCGACCCTAGCTATTACATGTATCTAGCTAGTTTGGGTGATGGTGATGCTGATGCTGATGTTGATGATGCTATTCTTGGGCACATGTTTGATAACGAAGCTGGGATCAGGGGGAATCCTCCGGCTGCCAAGAGGGTTGTTGAGGATCTTCCTGTTGTGAAACTTACATTGGAAGAAGGGGCCATGGTTTGTGCGGTCTGTAAAGATGAGATGGTGCTAGAGGAGGAAGTGAAGAGGCTTCCTTGTAGGCATTTGTATCATGGAGAGTGTATTACGCCTTGGCTGGGGATACGGAACACTTGTCCGGTTTGCCGGTTTGAGCTTCCTACTGATGATCTTGAGTATGAAAGGCATAGGAGATCACAAAGGAGTGACACCAGTCTTTTCCTTGCCGGGTAG
Protein:  
MATKPGPVTNLEEEAEDGGSTAVESSILTQDDETTSVFVCDDRDIDCDPYFPFAGHPISDSGSDSELDPYTCPIDFFDRESSEGVYLGSEGLTGDDFNVWGFYEPKEEEIVLGTRCESGSGSDQQGLRVTGLDSDSDYEDGVFDFTSGADEPGRVEVGAGLPPVWDYDLGDDETEEWEEVQNAINWTVRALSRSDEEEELSSQSRDDDEEEEHELDWQVLITINNVVNYIEQAEGITINPGDIDPSYYMYLASLGDGDADADVDDAILGHMFDNEAGIRGNPPAAKRVVEDLPVVKLTLEEGAMVCAVCKDEMVLEEEVKRLPCRHLYHGECITPWLGIRNTCPVCRFELPTDDLEYERHRRSQRSDTSLFLAG